data_management.helper_fxns
This file contains helper functions used throughout the various parsing scripts in this directory.
Functions
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Recursively find all files in the given directory with the provided |
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Looks up the extension for a basis set file format. |
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Sanitizes the basis set name. For example, replace numbers with the |
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"Desanitizes" the basis set name. For example, replace "_star" with |
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Writes a warning saying the file was auto-generated by the given script |
Module Contents
- data_management.helper_fxns.find_files(source_root, extensions, recursive=False)
Recursively find all files in the given directory with the provided extensions.
- Parameters:
source_root (str) – Root directory containing relevant files.
extensions (list of str) – File extensions to search for.
recursive (bool) – Whether or not to recursively search in subdirectories, defaults to False
- Returns:
Dictionary of file extensions mapping to lists of full paths to files found with the respective extension
- Return type:
dict of lists
- data_management.helper_fxns.lookup_extension(format)
Looks up the extension for a basis set file format.
- Parameters:
format (str) – BSE basis set file format identifier.
- Returns:
Extension for the file format.
- Return type:
str
- data_management.helper_fxns.sanitize_basis_name(bs_name)
Sanitizes the basis set name. For example, replace numbers with the corresponding word and hyphens, plus-signs, and other symbols with underscores.
- Parameters:
bs_name (str) – Basis set name
- Returns:
Sanitized basis set name
- Return type:
str
- data_management.helper_fxns.desanitize_basis_name(bs_name)
“Desanitizes” the basis set name. For example, replace “_star” with an asterisk character ‘*’.
- Parameters:
bs_name (str) – Sanitized basis set name
- Returns:
Unsanitized basis set name
- Return type:
str
- data_management.helper_fxns.write_warning(fout, script_name, prefix='')
Writes a warning saying the file was auto-generated by the given script and will be overwritten the next time it is run.
- Parameters:
fout (:class:io.TextIOBase) – Text file opened for output.
script_name (str) – Name of the script that generates the file.
prefix (str) – An optional, additional prefix to be added to every line of the warning comment. This is a quick an dirty fix to output this warning to non-C++ files, where comments may be different. Defaults to “”.